The film begins where ALF had ended, with Gordon Shumway—otherwise known as ALF, short for Alien Life Form—being captured by the US Air Force's Alien Task Force while attempting to depart Earth. ALF is kept under lock and key at Edmonds Air Force Base under the xenophobic orders of Colonel Milfoil (Martin Sheen), although he manages to charm his airman jailers and convert his cell into a bachelor pad. Acting on his own initiative, Milfoil plans on killing his prisoner under the guise of a beauty treatment, for which he has left a paper trail implicating his aide de camp, Lieutenant Reese (Scott Michael Campbell), setting him up as a scapegoat. They talk about ALF's relationship with the Tanner family, and the Tanners' move to Iceland.
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